mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TATTTCTTTACAGAGGGAGTA CTCCCTCCGTAGTGATCTA ATACTCCCTCCGTAGTGATCTAAACGCTCTATATTTCTTTACAGAGGGAGTA ACACTTCTTTTTCCACTGCAACACAAGCCAGCCAGTCGCTGGCTGGCGCTCCCTCCTTCCCAATTCGTGTCCTCCGGCCTCCCAGTATCCATTTATAGTTTTGGTGTATTABCTTTTATGGTGTTATGCTTAGCAAGTGCATTGGTTGTTGTATACTGCTACTAATCTAATACTCCCTCCGTAGTGATCTAAACGCTCTATATTTCTTTACAGAGGGAGTA 3 2 3' arm Triticum_aestivum mirnest MIR1122 0.00000000004 tae-MIR1121 0.0000000001 -17.5 .(((((((((.((((.(((.((.......)).)))...)))).))))))))) (-17.5)