mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTCTGTAAACTAATATAAGAA CTTATATTAGTTTACGGAGGT GACGCACGTACGGATACTAATAAGTTACTCTCTCTGTAAACTAATATAAGAATGTTTAGATTACTACTTTAGTATTCTAAACGCTCTTATATTAGTTTACGGAGGTAGTAGATAATATTACCTTCGTCCTGAAT GCACGAGGCAAGAATCAATCAACCAACCAACCGACGGGAGATGGCTTCATCGAGCAGATGCTGGTGGCGGCGGCGGTGGCCGCCCTGGTGGCCGTGGCGTGGTGCGCGCCGCCGCCGGTGAGCTTCACGGTGGAGAAGGGGTCCGACAAGACGCATCTGGCGCTGCAGATCAAGTACGACAAGGCCGGCGACAGCATGAAGGAGGTGGAGCTGAAGCAGAAGGAGGACTGGCTGCCCCTGAAGAAGGGCTACAGCGGCGCGTGGGAGATCAAGAGCGACAAGCCCCTCGAGGGCCCCTACAGCTTCCGCTACGAGACCGAGAAGGGCCAGCGCAACGTCTTCGACGACGTCATCCCCACAGATTTCAAGTGCGGCTCCACCTACAAGCCAGAGGCGACCTACTGAGATTCACCCATGCATCGGTTCCGCCATCATCGATCGACCTCGCAACTAAGATCGTGTCATAAGACGCACGTACGGATACTAATAAGTTACTCTCTCTGTAAACTAATATAAGAATGTTTAGATTACTACTTTAGTATTCTAAACGCTCTTATATTAGTTTACGGAGGTAGTAGATAATATTACCTTCGTCCTGAATTAATTGTCTAATTNNNGACGANNNNNNTANTNN 1 0 5' arm Triticum_aestivum mirnest MIR1122 6e-28 tae-MIR1121 0.0000004 -48 .........(((((...(((((..(((((.(((((((((((((((((((((.((((((((.(((((...))))).)))))))).))))))))))))))))))))).)))))....)))))..)))))....... (-48)