mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTCTGTAAACTAATATAAGAG CTTATATTAGTTTACGGAGGG GTTAATACTCCCTCTGTAAACTAATATAAGAGCATTTANATCACTACTTTAGTATTCTAAACGCTCTTATATTAGTTTACGGAGGGAGTAAAAT ACCTTCCTCGGCGACCGGCGGCGGCGACAATGGTGCAGGGACGCCAGGGCCAGCGCGTCAGGCTCTACGTGCGGGGCACCATCCTGGGCTACAAGAGGTCCAAGTCGAACCAGTACGAGGGCACGTCGCTGCTGCAGGTGGAGGGGGTGAACACCAAGGAGGACGTGTCCTACTACGCCGGCAAGCGCATCGCTTACGTCTACAAGGCCAAGACCAAGAGCAGCGGCACCACCGTCCGCTGCATCTGGGGCAAGGTCACGCGCCCCCACGGCAACTCCGGCGTCGTGCGCGCGCAGTTCCGCTCCAACCTCCCCGCCACCTCCATGGGCAAGAAGGTCCGCGTCTTCATGTACCCCAGCAGCACCTGAAGGTTTTTTTTTTGCCTATTCTATTTANTTGTANCTGGCTTCCTGGATGTCTGTTATCAGTTTGATGACAGGTTTATAACCNAAGATTTTGGAAAGAGTTTAGTTAATACTCCCTCTGTAAACTAATATAAGAGCATTTANATCACTACTTTAGTATTCTAAACGCTCTTATATTAGTTTACGGAGGGAGTAAAATGTTANTTTCATGTCATGTAACTCGAAA 0 0 5' arm Triticum_aestivum mirnest MIR1122 3e-35 tae-MIR1121 0.000000000001 -47 .....((((((((((((((((((((((((((((.((((.((.((((...))))))..)))).)))))))))))))))))))))))))))).... (-47)