mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTCCGTAAACTAATATAAGAG CTTACATTAGTTTACAGAGGG ATGGCCCTACAAAATTACTCCCTCCGTAAACTAATATAAGAGCGTTTAGAGTACTAAAGTAGTGATCTAAACGCTCTTACATTAGTTTACAGAGGGTGTACAAAATAATCATCA ATGCTTTTCCAGGCACGTTATTATCATGGCCCTACAAAATTACTCCCTCCGTAAACTAATATAAGAGCGTTTAGAGTACTAAAGTAGTGATCTAAACGCTCTTACATTAGTTTACAGAGGGTGTACAAAATAATCATCATCTCCATCCAATGTTCACCGACGAGCGTTTCAGTTCATTCAGGCCACGAAATCGTGCAGCAGGGGCGACGGCTCAAACTGCTGCCGTTGATCCAGCTGGTTCGTCGACTCATAGTCCGAAGAGGCCACGGCGGCGCCAGCGCCGGGATGAGCCGCGGCGGTGTTGTAGATATCTTCCTCCCCGCCGGCCGTGAACCCTGGCCGGTGAGCGTTCGGAGCAGAAAGGTTGTTCTCGGCGTGCTGCAATCCTAGCGTCAACGACACATTGCTGTTCTGATATCCCCCGAGCTCCGCCAAATGGTAGGCCATGAACCGCGCGCTCTCGTCGCCATGGAGGAGACCGCCGTCCGCCTCACCCGGTCTTTGGTCCTTCAACAGCAGGTTCATGAAGCCGTCGTCAGAGTTTGCCTCGTTGTGGAAGCTGGACGGCGCTCCGGTGAGACCCGCCATCTCCATGTTGGCTTTGAATTCACCGGTTTGGTAAGCCTGACCCTGGCTCATGGAGCATTTCANATCTTCCTTGTCTTCACAAGACGCCATTTTGTCCTTGCTTCTTGGTAANTTGTCCNAGGAGGAGTTTGANTCNAGCTCTGCCTCCCCGGTCTCTTCTTTGTACATGTCTTCNATCATCNGTTTCCATANGNGGACNCNGNCATTGATGAACCANNTCNAAATCTNAC 2 0 5' arm Triticum_aestivum mirnest MIR1122 9e-33 tae-MIR1121 0.000000000002 -46.4 .((......))....(((.(((((.((((((((((.((((((((((((((.(((((...))))).)))))))))))))).)))))))))).))))).))).............. (-46.4)