mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATACTCCCTCCGTCCCATAAT TACGGGACAGAGGGAGTATCA CTTCATATATAATACTCCCTCCGTCCCATAATATAAGAAGGGCATTTATCTTTTACATTACACTAGTGTCAAAAAAACGCTCTTATATTACATTACGGGACAGAGGGAGTATCAATCAAAAA TGAAACCAAATCATAAGGTGAACCCTTGTTTCAACACCACTTTTTCTACTACACATGCACCAGTTCTTTCTTCATATATAATACTCCCTCCGTCCCATAATATAAGAAGGGCATTTATCTTTTACATTACACTAGTGTCAAAAAAACGCTCTTATATTACATTACGGGACAGAGGGAGTATCAATCAAAAAAANCCCAGGANGGGAAGGACAAGAAGAACCGCAGAGACACGATGGTGAGTTTGCAAGACCAAAACCGTGACACTCAAAGGCCGAATCATTTGCTTGTGTTGCCTTNGAGAGAACCCAACAACATGGTGACTCCTCCTTAATCAACTGGCTTCTAACCANTGTGAGTGTGGANGGGCNAGATTCGGNNTANCCTTTATGGGANNCCACCAAAAAAGGTTANGGAAAGGGG 2 0 5' arm Triticum_aestivum mirnest MIR1122 0.00000003 tae-MIR1120 0.00000002 -40.1 ...........((((((((((.(((((.((((.(((.((((((.(((...(((.((((((...)))))).))).))).))))))...))).)))).))))).)))))))))).......... (-40.1)