mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TATTTCTTTACGGAGGGAGAA CTCCCTCTGTAAAGAAATATA AAGAAAACACTGACAGTTTCAACTTCCTGCTGCTCCCTCTGTAAAGAAATATAAAAGCTCTTATATTTCTTTACGGAGGGAGAACAAGTTAAGTGCAGGAATTCAGTAAATAA TTTTTTTTTTTTTTATCCTGTACAAAAATACTTGTATTATAGTATCTGTTAAAAAAATATACTTACAGTATTCTCATCAACACAGGAACAAAATGAAGAAGAAAACACTGACAGTTTCAACTTCCTGCTGCTCCCTCTGTAAAGAAATATAAAAGCTCTTATATTTCTTTACGGAGGGAGAACAAGTTAAGTGCAGGAATTCAGTAAATAATTCTGGGGTGTGGAACCTGAAGAAGTGTTTCAGCTGCAGAGAAACAGAGGAGCTCACCGGCAGCTAGTTGGCTGCGATCTTCACGTCCGGGTTGCGCATCGGCTTGAGCCACATGTCGGCGACCACCCTCGACGACATGCTCCAGAGCACGTCGGTCCCGACCTTCCCTGCAGCGGCCCCCGACGGNCGTCCCTTCTTGCCGGNCTTGCCGAAGCCCATAGGCGACGAGCCAGTGCGTCGCCGTCAGCCTCNGCTCTCCGCCGTCCCAAANGCTACGCCGGGTCNGGGGTC 2 0 3' arm Triticum_aestivum mirnest MIR1122 0.0000004 tae-MIR1121 0.00000002 -42 ........(((((..(((((.((((...(((.((((((((((((((((((((((......))))))))))))))))))))))....))).))))...))))))))))...... (-42)