mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCTCCGTCCCAAAATAAGTGT ACTTATTTTGGGACGGAGGGA AGTTGCCTCATACTTCCTCCGTCCCAAAATAAGTGTCTCAACTTCGTATTAACTTGTGTTGAGACACTTATTTTGGGACGGAGGGAGTATATGTTACC CTCGAGGTTTGAGGCTTCCCAGGATTAGGTAAGAGAGTACAAAATCCCATAGAAGCCTGCCAGATATGAAAGCTCAAGGCAGGCGTGAGAAATACAAATAGCCAATTTGCACTCTGGATATAAGTTGCCTCATACTTCCTCCGTCCCAAAATAAGTGTCTCAACTTCGTATTAACTTGTGTTGAGACACTTATTTTGGGACGGAGGGAGTATATGTTACCAAGACACGTGACCGATTTTTTGTATAATATTATTACATCTCGGACCTATGACCGACCAGAAAGATGTAGCTGAGCTCAAAACATATTCTTATGCCAGGCTTGTGTTATACCAACCCCCCCCCGCTTCAGGCATTTTCTGTGAATAACCTGGAATTCAGGTAGTCAGTAAAATGGCATTGTCCATGAATAAAATCTTTTTTATTTATTT 0 0 5' arm Triticum_aestivum mirnest MIR1122 0.000000000000002 far-MIR1122 0.000001 -54.3 .((.((...(((((((((((((((((((((((((((((((((..((........)).)))))))))))))))))))))))))))))))))..)).)). (-54.3)