mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCTCCGTCCCAAAATAAGTGT ACTTATTTTGGGACGAAGGGA TTACTAACTGATACTCCCTCCGTCCCAAAATAAGTGTCTTGCACTTATTTTGGGACGAAGGGAGTAGTATGCACAT TACTTTATTGTCCTTCTTTTGAGAAGTCCAATGCAACATGTGTCTTTATCTCTCCTAAATAAACATTCTGTAGGAGGGAAGCATAACTAGGCAATGCTCATATTTGAGTTGGTCTAAATTTTCATTGCCTCTTACTAACTGATACTCCCTCCGTCCCAAAATAAGTGTCTTGCACTTATTTTGGGACGAAGGGAGTAGTATGCACATGCACTATATGTTTGCATCCTGTGGTATCCTTGGGACAAGAACGAGTTTCTCCTTCCGTCGCATCGTCACCCCAAACATGTCAGCCATGTCAACATCCTCCTCCTGCATCCCGTCGGGGAGCTCCCAGTCGAAGCAATAGACAAGGTTGGCGAGCATGACCTCAACAGTGGCCAGCCCGAAGCCCATCCCGGGGCAAATCCTCCGCCCGGTTCCAAACGGCAGGAACTGGAAATCCCTCCCTTTGAAGTCGGCTGCTGCTTTGGCCTCGTCCATGAACCTCTCCGGCCAGAACTCCTCCGCTTTCTCCCCCCGGGACTCGGTGTCTCTTCCGAGAGCCCACGCGTTGATGATGACGCGTGTCCCGGCCGGGACCATGTAACCGTTGACGTTGTCGCACTCGGCCATGGAGAGGTGTGGGAGGAGGANCGGCNCCNGCNGGNGTANNCNGANCNNCTCCTTCNNANNGNCTTNANATATNANNTGCCNNTNANGNNNTCCNCNNGANTGNNNNNNGNNNNNNG 1 0 5' arm Triticum_aestivum mirnest MIR1122 0.000000001 osa-MIR1862d 0.0000002 -38.2 ...........((((((((.(((((((((((((((((...))))))))))))))))).)))))))).......... (-38.2)