mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GCGTGCGAGGAGCCAAGCATG TGCCTGGCTCCCTGTATGCCA AACAATGGGATATGCCTGGCTCCCTGTATGCCACTCGCGTAGCTGCCAACTCCCCAAACCTTGCGTTGGCTCTACCGCGGATGGCGTGCGAGGAGCCAAGCATGACCGTCTCT GGGTTTGTGTGTGTGTGCATGAGAGGGATTAGCTAGCTAGGGCACTCTGAGTCTGCGGAGGAGGAGGAGCTGCCGCGGCTCCCATCTATTTATAGGGGGCTGCGTACAGCGTACAATCAAGCTAGCAACACCTACCACTACCATGCTCCCTCCGGTCTTCTTCCTCCTCCCTCCATCCACACGCTCGCCAACACCTACCATTACCAAGCTAGCTCTCTCTCTCTCCTCTCCATGAGTAGGGCCATCCATCCACACGCACAATGTAGAGTGTCCTGAGGTCAGCATTGAGAGGGGGGCCTCGTTTGTGAGTGCGGAGAACGATGGATGACTCACGCCGTGCAATGCAGATTCTGGATGGGGAGGTAGGTGAAGGCTCGGCAGGAAGGAAGAGGTGAAAACAATGGGATATGCCTGGCTCCCTGTATGCCACTCGCGTAGCTGCCAACTCCCCAAACCTTGCGTTGGCTCTACCGCGGATGGCGTGCGAGGAGCCAAGCATGACCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 2 0 3' arm Triticum_aestivum mirnest mir-160 0.000000000000007 tae-MIR160 1e-59 -53.5 ....((((..(((((.(((((((.(((((((((.((((((((..((((((..............)))))).))).))))).))))))))).))))))).))))).)))).... (-53.5)