mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATACTCCCTTCGTTCCAAAGT TTTGGAACGGAGGGAGTATAT TTTTTTGACGGCCGGCAACTCCAAGATATACTCCCTTCGTTCCAAAGTAAGTGCCGTGGTTTTGATTCNATTTTGGAACGGAGGGAGTATATGTTTGGCCGCCTTTGTCATTTGAA CGGGTCGTGCGGCACGGTGGTGCGCAACGCGGAGCTCAAGGTGGTGGACCCCGACACGGGCCTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCGCAGATCATGAAAGGCTACCTGAATGACCCCGTGGCCACGGCCGCGACGATCGACGTCGAGGGGTGGCTCCACACCGGCGACGTCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGCGTCAAGGAGCTCATCAAGTTCAAGGGCTTCCAGGTGCCGCCGGCCGAGCTGGAGGCTCTGCTCATCGCGCATCCCTCCATCGCCGACGCGGCCGTCGTACCGCAAAAGGATGACGCCGCCGGTGAGGTCCCGGTGGCGTTCGTGGTGCGCGCCGCCGATTCCGACATCGCCGAGGAGGCCATCAAGGAGTTCGTATCCAAGCAGGTGGTGTTTTACAAGAGGCTGCACAAGGTGTACTTCACCCACNCNATCCCCAAGTCGGCGTCAGGGAAGATACTGAGGAAAGAGCTCAGAGCCAAACTCGCCTCCCCTGTCACTGCCTGAACAACTACTACTAGACTACATCCAAGATGTCATTTTTTGACGGCCGGCAACTCCAAGATATACTCCCTTCGTTCCAAAGTAAGTGCCGTGGTTTTGATTCNATTTTGGAACGGAGGGAGTATATGTTTGGCCGCCTTTGTCATTTGAAA 0 0 5' arm Triticum_aestivum mirnest MIR1122 0.0001 tae-MIR1137 0.0003 -45.1 .....((((((..(((....((((((((((((((((((((((((((((.(((............)))..))))))))))))))))))))))).)))))..))).))))))...... (-45.1)