mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCCCTCCGTAAAGAAATATAA ATATTTCTTTACAGATGGAGC CAAAAAAGCACTCCCTCCGTAAAGAAATATAATAAAATAATGATCTAAACGTTTTTATATTTCTTTACAGATGGAGCAGATGAGT TCTCCCGCACCCCGGCGCGTACACCGTCTGGCGGCCCAGCTGCTGGAAGAGCAGAACACCAGCCGGTGGATCCCGAGCACCGGCCGCGGGCCCTCGTAGCACACCACCTCGGTCCCGAAAGATACTCCTGTCGTCCCCGGGATGTCGGTGACCAGCCTGCATCGGTAGATCACATTAATATTGGTTCAGCACTTAATTACAAAAAAGCACTCCCTCCGTAAAGAAATATAATAAAATAATGATCTAAACGTTTTTATATTTCTTTACAGATGGAGCAGATGAGTAGTCTTCAGTGAAATTGATGATTAAGTTTGTGCAGGAGATTCTGGTCTCAGGAAACCTCTGCAGTTTGGACCTTTGGGGTGACCCTTTTAGGCTATGAGTAGGCCATCCAGGTATTTGCGAATTGGTTGTCAAGCAGCCCCAGCATGGGCATGTAAAGAGGGATACAAATTTGGCGCCCCCTGCCTCAATATAAGTGCAAAGCAAACATTGCCTTCCATGCCGGTGTTCTAGATTTTTATATCGCGTCACAGGAATTAAGTAATTGATGGTGTTAAAATAAATATTTCTCGCCGAAGCCAATTTTTGTGCTGCACAAGTTTTATTTGAAAAATAAAAACTGAATAAAGCATGAGATATGCATTTATTGGCATGTTGCACTATATATTAGTTTCTTTTAGATGATGACTCTTTTTATTTCTTACACTAATG 2 0 5' arm Triticum_aestivum mirnest MIR1122 0.000005 tae-MIR1121 0.000004 -20.2 ..........((((.((.((((((((((((((.((................)).)))))))))))))).)).))))......... (-20.2)