mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGACTAGATTTCATGCTCGTCT GCGAACATGGATCTAGTGCACG TCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTGGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA CCCAATTGAGCTATGAAAACCGATCAAACCGATCGCAATTGTTGGCAGGCACGAGAGCAATGACATGACATGCAAACTACTAAGCCCCAAACGGAAAACCCATTGTCCAATGCCCAATATTCAAAACCCAAAACGAAAGAGAAAAACCAAAGCCAAAGCCAAACCCAATCACCAATCACAAAAATGCCACAGAAAGTCGTGCAGGGGCAATAATCATCATCCGGGCGAGAAAGGAGCCCAATAGTGGGGATATGGGGAAGGATGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTGGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAACGAAGAGAGCGGAGCTTTCCATCTCGCGGGGATCGGAGGGAGTCGTTTTCCAACCCAACCCCTCCGGCTGATTTGGCCAATTAGCCAAACGCATTAATTATGGGAAAAGTATATTTGATTGACCCGTGACCCACATCGAGTGGCACACGCCCCGCAGCAGCAGCAACTACCGAAAAATGAGGGCGTGTTGCAAGATACTCGTAGCAAGCGCCAAGCACCACTACATGGAGTCAATGGCCTGCTGTCCCGCATGCTGCACATGCGCTCACTCCGGGAAA 2 2 3' arm Drosophila_melanogaster mirnest mir-996 6e-46 dme-mir-996 4e-50 -34 ......(((((((.((((.((.(((((.((((((((((((.((((((((((...)))))...))))))))))).)))))).))))).)).)))).)))))))..... (-34)