mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCCACAGGCTTTCTTGAACTG GTTCAAGAAAGTCCTTGGAAA CGTGCAGATCGCGGCCATGCTCTCCACAGGCTTTCTTGAACTGTGAACTCGCGCGCGTGCGCCGCCGGCCTGCTACTTCTCGCTTCGATCTTGTCTGCCTAGCTTGTTCATGGTTCAAGAAAGTCCTTGGAAAACATGCCCGCCTCTCTCCT GGCACGAGGGTGAAATTCCATTCTTCCTTCCGGTTTTTAACCCCCTCTTCCTCCGCCAAAATTCACGAGCAGCCAATCACCCCCCTCTCCTTCTCCCTTCGTCCTCCTCCATCTCGATTCCGTGCAGATCGCGGCCATGCTCTCCACAGGCTTTCTTGAACTGTGAACTCGCGCGCGTGCGCCGCCGGCCTGCTACTTCTCGCTTCGATCTTGTCTGCCTAGCTTGTTCATGGTTCAAGAAAGTCCTTGGAAAACATGCCCGCCTCTCTCCTCTTCCTCCGGCAATTCCACACGGATCCATCCATCGCAACGACTGCCGGCCGGCCGAAGATCGCCATGCAGGCTCTGGCGCAAAATTCTCTGGTACGTGGATCTGATCGGAAAATTCATCTCTTGGTGATGACTTCACCGCTTCCCGTGAGAAGTTTACCTACCAAAGTTTTATCTGAGGTTGTTAACGATCGACATGCATGGGTCATATCGTATGCGCGCGCGCAGAGATCTGCAGATCGATCTTGGCCGCGTGCGCTGAATTATTCTTCTCACTTCTCA 0 2 5' arm Festuca_arundinacea mirnest MIR396 0.00000000000004 far-MIR396 7e-77 -51 .....(((..((((.((((...((((.(((((((((((((((((((((..((..(((.(((....(((...((........)).)))....))).)))...))..)))))))))))))))))).)))))))...)))).)))).)))..... (-51)