mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGCAGACTGTGACTTGTTGT AACAAAATCACTAGTCTTCCAGA CCGGCGGGGCCGTGCGCCCTAAGGCAGACTGTGACTTGTTGTGGTGGGATGAGCCATACAACAACAAAATCACTAGTCTTCCAGAGGGCACCGCGGCCGTCCT TCCCGGGATGTTCTGTGCTTCTGTTTGGCCATAGGTACCCTGCCCGTAGGGCTGTAGTGCAGGGAGCTGCTGCTGGGGACGCAATCAGAGCTGAGAGGCAGTGATGTGGGGTGCCCATCCTTGGGGGCAGTTCCCAGCGGCGGGGCAGCTCCAGCTGCAGCAGCAGTGGTGTTTCAGACCGACCTCTCGTTGCTTTGCTCCGGGTTGTCACCAAAGCAACGTCCGAGGTGATCAGAAGTGGAGAGGGATCCGGGAGCAGCCCAACCGCATTGCTCGCCGTGGGGCTGGGAGACCTCCTGCAGCGCCGGCGGGGCCGTGCGCCCTAAGGCAGACTGTGACTTGTTGTGGTGGGATGAGCCATACAACAACAAAATCACTAGTCTTCCAGAGGGCACCGCGGCCGTCCTCGTCCCGTGAGCGCCACGCGGATGTCACCCAC 3 2 5' arm Gallus_gallus mirnest mir-7 2e-45 gga-mir-7-2 2e-51 -45.1 ..((...(((((((.(((((..((.(((((((((.(((((((.((((......))))...)))))))..)))).))))).))..)))))..)))))))..)). (-45.1)