mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTAGCTCAGTTGGTAGAGCA TTACTGATTACTGAATTACACT ATGAAGTTACATTACTGATGGTTACTGATTACTGAATTACACTTATCCAAACTAATGTGTTCAAAGCAATGAAGTCATTAGCCTTCCCTGTAGCTCAGTTGGTAGAGCATGGTGTTTGCAACGCCAG AAGAAAATAAATCACTATTATCATCAACAACAAAAAGAAAAATCAGCATCATCATCAATAACAAAAAGAAAAATCATCATCATCATCATCAATAACAAAAAGAAAAATCAGCATCATCAATAACAAAAAGAAAAATCATCATCATCATCATCATCAATAACAAAAAGAAAATCAGCATCATCATCATCATCAATAACAAAAAGAAAATCAGCATCATCATCATCATCAATAACAAAAAGAAAATCAGCATCATCATCATCATCAATAACAAAAAGAAAGTTGTCATTATCATCATCAGCATCATCAATACCATCATAATCATTAGCATCCAAAACAACAAAGTGCAGTACCTCAAAACATACTATATACATCAACCATATCTGAAGAGTATTGATGAAGTAATTTACTGATGATCACTGAGCAGGTCCTCAAAACATACTATATACATCAAGCATAACTGAAGAGTATTAATGAAGTTACATTACTGATGGTTACTGATTACTGAATTACACTTATCCAAACTAATGTGTTCAAAGCAATGAAGTCATTAGCCTTCCCTGTAGCTCAGTTGGTAGAGCATGGTGTTTGCAACGCCAGGG 5 1 3' arm Salmo_salar mirnest tRNA 0.0000000001 100 -26.1 .........((((...)))).((((((...(((((.(((((..........((((((..((((......))))..)))))).......))))).)))))))))))....(((((((...))))))). (-26.1)