mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTTTGTTCGTTCGGCTCGCGT GTTGAGCCATACGCACAATACC ATTGATTTTCTGTATTTGCCTCACGTTGAGCCATACGCACAATACCTGAAGATGAAGTTTTGTTCGTTCGGCTCGCGTTAAGCAGGTACAGATTTTCTA GCACGAGGCCGCTGGAGAATCCTCTTTAAAACCAATCTGGAAAAAAAAGAAGGAGAGAGTGAAGATAAATGGAAGGATGGCCTACGATGTCCCGAGTATATATAGGCTACCTGCAGCGGGCCACACTCCATTCAGTGTTGCCTACAAGATGAGCACAATTTGCAGGTGTTACCGATATAGTGTGGGGATGGAGCAACATATGGAGACTACAAACCTGATGTAGTGTAGTCCAAGTACTTTTTTCCAAGACTGGATCATCATATTTGGATTGATTTTCTGTATTTGCCTCACGTTGAGCCATACGCACAATACCTGAAGATGAAGTTTTGTTCGTTCGGCTCGCGTTAAGCAGGTACAGATTTTCTACAAAGCAGCAAGAGCAAGTTCATATTGTGACAGATGTCGTTGTCGTTGATGGTGCTCTCTTGTCCTGTGACAAATACTGACTTTTTTGTACACTAAAATTATAGTCATACAACCTTTCGTGTTTTGCATTCGTTAGGCTATATTGAATATCGTATGTGGTTTGAACATTTGGGTTCATTTCCCCCCGAAGACAACGGATACAAATTATCGACCCCAATTTTTTAGCCAAGTGGGATAATTTTTATTGCTGTATGTATGGATAAAGTTTTCGTTACTATTTTTGAAAAAGTATATATATTATTTTTTGCTCACTTAATATAACTTAGTATGCGCGCATCT 4 1 3' arm Salmo_salar mirnest mir-375 2e-21 fru-mir-375 2e-26 -32.1 ...((...(((((((((((...((((.(((((..(((.((((.((...........)).)))).)))..)))))))))...)))))))))))...)).. (-32.1)