mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGCTCTGCGAGGTCAGCTCA AGCAGGCCTGTCAGGGCGTTG CCAGCACCTGTGAGGTTGGTGGTGCTGACGTTGGCTCTGCGAGGTCAGCTCAAGGTGGGTCTGGATATTGAGCAGGCCTGTCAGGGCGTTGTCACCCACACCAGGAGCACGCAGCAGGT GNNNNNNNNNNNNNNNNNNNCNNNNGNNTNNNNNNNNNNNTNGGNNANNNANGNNNNNNCTCCAAGNNNNNNNNNNNCTTNNNNNAAGCATCCAATCTCTTCCTGTTCTCCTGTACCCNNNNNNNNNNGGNNNGGGGGCTAGACACCAGTGNNNNNNTGAGGCCACTNATNNNGGNNCTGNAGTCTCTTGTCNNAGGCCAGCGGGAAGACTGGCAGGGTCCACCTGCTAGTGAAGGGCTCTTGGCAGAGGGCCCCAGCCTTTTCTGCCTGTTCCCGAAGTTGCTGACCTGATAAGCAGACTGTCCAGCTGCACTTGTAGGGTAAGACCTGGGAAGCTGTTCCTTTTGGCAGACTCCTTCCCAGCGCCTCACTCTGTATCCAGTGGCATTTGCCCACGAGCTTCTCTGCTAGCCCCAGGGTCACTCCCTCCCTCATTCTTGAAGTTCGCATAGCAATAAAGGGTGTCCTGAACCCGCAGCTCTTCCCAGGCCTGGGGTGTCTGGGGTTTGGACTCTGCCGTGGGGCAACGTGAGGGCAGCCAGCACCTGTGAGGTTGGTGGTGCTGACGTTGGCTCTGCGAGGTCAGCTCAAGGTGGGTCTGGATATTGAGCAGGCCTGTCAGGGCGTTGTCACCCACACCAGGAGCACGCAGCAGGTGCGGCAGGCGGCAACACTCCTGCTGGGCAGCGGCCCAGGAGCCCACGTGCACTCCCCATCTCTGCCCCCGTTGCACTNNNNAACCCAAATGCATNNNNNNNNNNA 5 0 5' arm Canis_lupus_familiaris mirnest 100 cfa-mir-1842 5e-28 -41.4 .....((((((...(((((((....(((((...((((((..(((((.((((((.((........)).)))))).)))))..))))))..)))))....)))))...)).....)))))) (-41.4)