mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGTTCTCAGGTCGCCCCTGC GGAGCGACCTGAGACCACAT AGCCAGCCACAAAGGGTAGAGGAGTCCCTGAGGAGCGACCTGAGACCACATGTGTGCACCCTCACCACACTCCAAAGTGAGAGTACATAACCACGTGTTCTCAGGTCGCCCCTGCGAGACTTTCCGTTTACCACATAACCGCG AAATGATAAGATGAGGAATGTAGAGGTGTGTATATGTTCACAGCATAAGCCAGCCACAAAGGGTAGAGGAGTCCCTGAGGAGCGACCTGAGACCACATGTGTGCACCCTCACCACACTCCAAAGTGAGAGTACATAACCACGTGTTCTCAGGTCGCCCCTGCGAGACTTTCCGTTTACCACATAACCGCGGCGATTTGGTGAGATGAGCAAGGAACAGATGTAGGTAAGTTATCTTTCATCTTCCCTGTCTTAAATAATCTGAATAAGATTACCTGACCCTGTTATTCAGGATTTGAGGTGATGAAAGTGTGACCTGCTAATGTATTCTATTTTGTGCTTACATTAGATTTGATCAAAATTTAACAGTAAGCATAGAAGTAGGAGATACAAAACCATGTCCAATTATGGTAAAGTTGGTAATCCTCATTGTTTTTGGAAATTCCAGTGACTCAAATAGTATAAGAGATAACTAAGCAATCAATCATGATGCTCATTGTTTCTTGTTTGCTCTCACTTGTCCTAATTACGAAGGCAATAAAGAGAACTACTTACTAGAGTTCCAAGTTTGTAACACTAAATGCAATATAATAATCCAGCATCATGATCTTCATCGTTCCTGCTTTATCTTCCCAAGTAAAACACTTGTTAGAGCAGAGTCACA 3 0 3' arm Fragaria_vesca mirnest 100 osa-MIR398b 0.0001 -46.6 .....((.......((((((((((((..(((((.(((((((((((.(((.((((((.((.(((((...........))))).)).))))..)).))).))))))))))).))).)).)))..))).))))))........)). (-46.6)