mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTGGGTTGGGGGTGGGGGAAG TTTTCTTTCCCCAAAATGTC AGATGGGAAGCCCCCATTTTCTTTCCCCAAAATGTCCTAGACTGGGTTGGGGGTGGGGGAAGGGTTGGCTTCCTG AAAATTTTATTTAAAAAACCTTCGGTGCAATATTAAAAAGCAATACGGCCAGCTGGAGCGACAACGAACAGAAAGAAAAGGGGAGGACGGATAGGGAAGATCCAGGGACCCCTTCCCCAGCTGCTCCCAGGGGCTGGAGGCCAGGGCCAGACTGGGGAGGGGCCTGGGTGGTGGGGGAGAGAGGAAAGGCCACCCACCAAAATGAACAGGCAGAATAAAACACTGATATAGGAAATATCTGGCTGAACTGAAGAGGATCTAGGGAAGATGGGAAGCCCCCATTTTCTTTCCCCAAAATGTCCTAGACTGGGTTGGGGGTGGGGGAAGGGTTGGCTTCCTGGG 5 1 3' arm Ovis_aries mirnest 100 100 -35.3 ....(((((((((((.((((((.(((((((...(((...)))....))))))).)))))).)))..)))))))). (-35.3)