mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGGCTCTGGGTCTGTGGGGCG CCTCATGGAGGCCAGTGGCCCCG GGCGCCTCTCCTTCCGGTGAGGGGCTCTGGGTCTGTGGGGCGGGGCCTCATGGAGGCCAGTGGCCCCGGGACCTGCGGAGGAGGGG TTCCCGGGATACCCAGGCAGGGCGGGGCGGCACCTCGGCTCCCGCGGCGAGGACACCCCGGGAGCAAGGCGCCACGCGTCTGGGCGCCTCTCCTTCCGGTGAGGGGCTCTGGGTCTGTGGGGCGGGGCCTCATGGAGGCCAGTGGCCCCGGGACCTGCGGAGGAGGGGCTGAGACCCGGGGCTCGGAGGGGCGGCTGGCACCTGAGTCGAGGGTACACTTCCGAGTGACAAGGTTCATCATGGAGGCAGGTATCAAGCTAGGGATGCGGTCCATCCCCATCGCCACCGCCTGTACCATTTACCATAAATTCTTCTGCGAGATCAACCTGGACGCCTACGACCCCTACTTGGTGGCCATGTCTTCCCTTTACTTGGCCGGCAAAGTGGAGGAACAGCATCTGCGCACACGTGACATCATCAATGTTTCCAACAGGTACTTCCACCCGGGCAGTGACCCCTTGGAGCTAGACTCGCGCTTCTGGGAGATCCGGGACAGCATCGTACAGTGCGAACTGCTCGTGCTGCGGGTCCTGCGTTTTCAGGTCTCCTTCCAGCACCCGCACAAGTACCTGCTCCACTACCTGGTCTCGCTCAAGAACTGGCTGAACCGTTACAGCTGGCAGCGGACCCCTGTCTCCGTTACTGCCTGGGCTTTGCTACAGGACAGCTACCACGGGGGGCTTTGCCTCCGCTTCCGGGCTCAGCACATAGCCCTGGCAGTAATCCACCTGGCCCTACAGCCTATTGGGTTGAAGTGCCTGCTGAGGCCGAGGCGAGAAGCATGGTGGCAGGTGTTTAGTGAAGACCTTACCAGCCAACCATTGATAACATTGTGTCTGATCTCATTCAGATTATACCATGG 2 2 5' arm Ovis_aries mirnest 100 100 -45.8 ....((((((((((.(((..((((((((((.((((((((((...))))))))))..)))).))))))...)))...)))))))))) (-45.8)