mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCCGGAGGGATGCCTTCCTTA AGGGGGGACTCCTTCTGGATA AGGACAAGGGGGAGGGGGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTACGTCCATCCTCAAGCTGCTTCCCTGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATC TTTTTTTTTTTACCAAACAAGTTTTTTGTTATTATTATTCAACCACACACGCATCAGGCGTCACTGACACTTGAAATCCGAGAACATACACTATTTAACCACAAAGCATCGAAGAACCCCAAAAGATAGAAGAAGCACAGGCAAGGCATTACCTTCAACACCCACCGGGGAGACAAAGGACAAGGGGGAGGGGGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTACGTCCATCCTCAAGCTGCTTCCCTGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATCTTTGCCTTGACATTATCAATCGTATCTGAGCTTTCAACCTCCAGAGTGATAGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCATACCACCCCGCAGACGGAGAACCAAGGGGAGGGTTGATTCCTTTGGGATGTTGGAATCCGCAAGGGTACGACCATCCTCAAGCTGTTTACCAGCAA 3 0 3' arm Gerbera_hybrid_cultivar mirnest 100 100 -44.9 ......((((.((((((((..(((((((((((...((((..(((.(((((......)))))...)))((((..((....))..))))..))))..)))))))))))..)))))))).))))..... (-44.9)