mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGAATTGTGGCTGGACATCTG GATTGTCCAAACGCAATTCTTG GCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGGCCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAG CCGGTGCTTCACAGAGCGAAGCGGAACCCCGCAGGAGACCGGGGCCCTGAACTCAGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGGCCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCTGGAAGCGACAGGGGCGGGAGCCGCAGGGAACCGAGCTCGGCGCGGGCAAGACCCCTCGGGTGGCGGCTGGCTGGCCCCAGCGCGAGCATCGCGGCCCCGGCTGGGCGCGCAAAGGAGGGACGCCGGTCCCTGTCACCAGCGCCGCCATCCTCCTCTCTTCGTCGTCGTCCTCATCCTCGTCCTCCTCCTCCTCTGCGGGTGACCAGTCCTGGCTGGCGGGGTCCTCCAGCCGACAGCGTCGTTTCCCCCTTTTTCAAATTTCGGCCGGGAACGAAGCTGGCATGCCACGGTGGGGCCCAATTGTGGTCCGGAGAGCTCGTCCTCGGCCGGAGCCGCAGGAAGTCGGGGGCGAAAGGAGATGCCGGCGGACTGCGCTTGCTATACTCGTTTGAATTGATTCTAACCTAACCTCCCCTGCCAATACCCCCAAAACAAACCCAA 3 1 3' arm Ovis_aries mirnest mir-219 1e-34 eca-mir-219-2 2e-41 -31 .(((.(((((.(((.(((((..(((((((((((..((......))......)))))))))))..)))))))).))))).))) (-31)