mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TACTGAAACTGGGCTCGTAGT TGTGGGCTAGTTTCAGACA AGGAATAGTAGTACTGAAACTGGGCTCGTAGTGTGTGCTGTATAGCATGTGGGCTAGTTTCAGACAAGGTTGAA GGCTTGTCGTGGCCATGGGATCTCCAACTGCATGCGAGAGCAACGTGGAGAGACTTTGACAGCACAGGTTAGCATAATACCTGCAGCTGCCACTCGCCTCTCCTATAATCTCTCAGGATTTTGGCTGGAAGTCTTCCACTTGAATCCGTGTGTTTCCATCAAAAATCACATTCTGTGTAGAAGATTTTGGTTAGAGCTTCCACACTCTTTTGCAGGTTGCCCCATTTTTTAACTGGCAGTGCCTGATACTGAAGTAACTGAAAATACCAGCTTGTTGCTGGAGCCGTGCTTTAGAATAAGGTAAAGTTGGGTATTGGAGACAGCCTGACCCTCCAGTTCCCTTTCCCATCGGATCTAAACCCTGGTCCTGGTGGTCGTAAGAGGAGGAATAGTAGTACTGAAACTGGGCTCGTAGTGTGTGCTGTATAGCATGTGGGCTAGTTTCAGACAAGGTTGAATTCTCTTGGAACTTGTTTTCTCCACCCCTTAAAATGGGATAATCTTGGGCTTAAGGGGAGACTATGTGAAACTGGCAGTTGGTATAGTAAATGCTGGCTAATATTTTTGTATTTGGGAGGGATATACCAATAGCTTTCTTGCCTCCTGATTGATATTTTTCTCCCCCTAAGACCTGTTGCCAGTAAAGCTATCTTCATCTGTGTGGATCTACAGAGTTGGGAGAGAAAAAGGCAAATGAAGACAAGGGGGCGCTTTCAGGTGGAAACCGGTTTTGTTTTTTGGTGATGCTGCTACCTGGCATATAAATGACCAATAAAAGACTCACAGATG 4 2 5' arm Ovis_aries mirnest SNORA61 2e-20 bta-mir-2311 9e-16 -19.8 ..........((.((((((((((.((((.....((((((....))))))))))))))))))))))......... (-19.8)