mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGAGTGGAGTGGAGTGGTGT GTCAATCTCTTCCATTTCGGT TGTTCTCTGAGATTGAGATAAGTAACTGTAGTGGAGTGGAGTGGAGTGGTGTAGTCAGTCATCAGTCATGTCGTCAATCTCTTCCATTTCGGTTTCAAATGGTCGCTGTTTCAGTTTCAGT ATATGGCTGAAGTGGTATCCCGTTTTCCGTGTTCTCTGAGATTGAGATAAGTAACTGTAGTGGAGTGGAGTGGAGTGGTGTAGTCAGTCATCAGTCATGTCGTCAATCTCTTCCATTTCGGTTTCAAATGGTCGCTGTTTCAGTTTCAGTCTGGGGGCTGTGCCGTTCCAAACCAAGAAGCCATTTTCCCAATTGCAATTCCCAAGAAGCAGAGGGAGAGGGGCGATGGTGGTGGCGATGAGCGTGGAGGCGGGGGTTGGAGTGATGGGCACCAAGTTGGGGATGATGAGCTTCTTCCAACAAGACGGAGTGGTTGTTCCCGTCACCGTCGTCGGCTTCAAGGAAGGCAACATCGTCACCCAGATCAAGACCCACTCCACCGACGGTTACAGCGCCGTCCAGGTTGGCTACCAGAGGGTCAGGGACCGCAAACTCACCAAGCCCGAGATGGGTCATCTCCAGAAGGCCGGTGCCATCCCCATGCGCCACCTTCAGGAGTTCCGTCTCCAATCCGTTGATGGCTTCGACCCCAACCAGCCCCTCCTCTTCGATGAACTCTTCAAGGAGGGTGACCTCGTTGATGTCTCCGGCACCACCATCGGCAAGGGTTTCCAAGGTGGTATAAAGCGTCATAACTTCAAAAGGGGTCCAATGAGCCATGGTTCCAAGAGTCATAGACAACTGGGATCAATTGGTGCTGGAACCACACCTGGGCGTGTATAC 3 0 5' arm Glycyrrhiza_uralensis mirnest 100 cre-MIR1171 0.0004 -31.2 ......((((((((((((((.((.(((((..((((((((((.(((.(((((....((...........)).))))).))).)))))))))).......))))).)))))))))))))))). (-31.2)