mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GAGGCTGTTGCAGCTGCTGCA TAGCCGTTGTTCTCGCCTCTT TTCCACTACCGCAGCTTTTAAGACTTTTGGTGAGGCTGTTGCAGCTGCTGCAAAGTCTGCTCAAGCAAGCAATGTAGCCGTTGTTCTCGCCTCTTCTGAAGGACTTTCTAAAGAAACAAAGCT AGCACACTCCTTCTTTCTTACTCATTCTCAACTGTATCTTCGTCTTCTCTCTTTCTTACCAGAATCACTTCTCGTTTCTCTTTCGCTGCACCGCTTCCTCTGCGTTCCAACCACACCAAGCACATGGCTCACACTCTCGCTCGCGCCACTGCCACTCTCGGCCTTACTCACCCTTCCAACACCGATTCCCCCAAGATCTCTTTTGCTGCTAAGGAGGTTGATGTCACTGAATGGAACGGAGACATCCTTGCAGTGGGTGTTACTGAGAAAGACTTGGCTAAGGATGGGAAATCGGGATTTGAGAATCCGATTTTGAAAAAGATTGACTCCAAGTTGGGTGGTTTGTTAGCTGAAGCGTCCTCTGAAGAGGATTTCTCAGGCAAAGCTGGCCAATCAACGGTTCTTAGAATTACCGGCCTCGGGTCGAAGAGGATTGGCTTGATTGGGCTTGGACAGACCACTTCCACTACCGCAGCTTTTAAGACTTTTGGTGAGGCTGTTGCAGCTGCTGCAAAGTCTGCTCAAGCAAGCAATGTAGCCGTTGTTCTCGCCTCTTCTGAAGGACTTTCTAAAGAAACAAAGCTCAGCACTGCTTATGCAATCGCCACTGGGACTGCGCTGGGAATATTTGA 5 0 5' arm Arachis_duranensis mirnest 100 100 -35.3 ..........((..((((.(((.(((((((.(((((....(((((.((((((..((.(((....))).))..)))))).)))))....)))))..))))))).)))...)))).......)). (-35.3)