mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGATTTTATTTTTGGCAATGC ATTGTTTGAGCATTGTCACA GAAGGCAGTGTTGATTTTATTTTTGGCAATGCTACAGCATTGTTTGAGCATTGTCACATTCACTGC GGCAGGATACTGCTTATCTCCATTTTGGCAAGCATTACTTGAGAGATTGTTATATCGAAGGCAGTGTTGATTTTATTTTTGGCAATGCTACAGCATTGTTTGAGCATTGTCACATTCACTGCAAATCTGCAGGTTTTATTACTGCACAATCGCGGCAATCAGCTCAAGAAACAACAGGCTATGTATTTTTGAGGTGTGTGATTACTGGGAACGGTGAAACAGGCTATATGCATCTTGGACGTCCGTGGAAACCATTTGGAAGAGTGGTTT 5 1 5' arm Gnetum_gnemon mirnest 100 100 -18.9 ....((((((.((((.....(((.((((((((....)))))))).)))....))))....)))))) (-18.9)