mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATGAAGTGTGATGTGGATAT ATTCATGACACTACATAC GGAAGCATCGGGAATTCATGACACTACATACAATTCGATTATGAAGTGTGATGTGGATATCCGTAAAGAT CACGATTGGTAATGATCGATTCAAATGTGCAGAAGCTCTTTTCGCAACCTAGCTTTTTGGGAATGGAAGCATCGGGAATTCATGACACTACATACAATTCGATTATGAAGTGTGATGTGGATATCCGTAAAGATCTGTATTCGAACACCGTGTTGTCTGGTGGAAGTACGATGTATCCTGGTATTGCTGACCGTATGCAGAAGGAGATTAGTGCTCTAGCCCCCAGTACAATGAAGATAAAGATCGTTGCACCACCTGAACGGAAGTACTCAGTATGGATTGGTGGTTCTATTTTGGCTTCATTATCAACATTCCAACA 2 2 3' arm Schistosoma_mansoni mirnest 100 gga-mir-3533 0.00000005 -15.7 ........((((.((((((((((((.((((.........)))).)))))..))))))).))))....... (-15.7)