mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGATCTGCCTGCCTCTGCCTC GGTAGACCAGGCTGGCCTCG GAGGCTGTCCTGGAACTCGATTGGTAGACCAGGCTGGCCTCGAACTCACAGAGATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAG GGTTTTTTGAGACAGGGTTTCTCTGTTTCTCTGGAGGCTGTCCTGGAACTCGATTGGTAGACCAGGCTGGCCTCGAACTCACAGAGATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCACCAACGCCCGGCCAGAAGCAAGGTCTTAAAGAGGCTTTTTGTTCTCCAACCACACTGAGGAGAGGTAGCAGTTTGAGACTTGGTGAAGAGCTCGTGCAAGGATCAGCCCTTTCTGCCTGAGCTAGAGGTGAGAACTAGTGGCCGGCTGCTTTGCTTTTCTGATATTCAGCTTGAAACTTGAACCCCAATATCAGTCTCTGGGTCTTTTATTTTACGTGTTGTACTTTATGTTCTGAATTCAATCCCCAGAGATCATATTGTGGAAGGAGATATGTAGTTAAACTTTCTTTTGTGGGACCACCAGCTCCAAATAATGACATGGAGGCTTACTATTAATTATGAAAGCTTGCCCTTTAGCTTAAGCGTGTTCGAGACTAGCTCTTATAACTTAACCTGGTTCTATTAATCTCCATTCTGTCACATGGCTTTTACCTCCCTCCCATTCTGTACACGTGACTTGCTCCCCATCTCATCGGGGTCTCTCACACACCTAAATTCATCTCCAGCACCCCCACTCT 5 1 3' arm Schistosoma_mansoni mirnest 7SK 0.000000005 mmu-mir-3470a 5e-18 -34.1 ......(((((((.(((((...((((((.(((((.((.(((.........))).)).)))))..))))))...))))).)))))))..... (-34.1)