mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGTCTGCTGAGTTTCAGAAA TCGAAGCTTTCACAGACTGCA GGAGACAGTGATAGTCTGCTGAGTTTCAGAAAGCTGTTTGTTATCGAAGCTTTCACAGACTGCATACCTGTT GAGGGGGCTGGATGGGCAAGTCGGACGCGATGGCTCGAGCTCGGGCGGTGGCGGCTGTGGCCGGAGGCGGCGGTGCCTCCTCCTCCTCGCCCCGGCGCCGGCGGTGATCGGAGCGAGCTGCCGCGGCCCCCGATGAGACTGCTGGTGGGCTGGCTGTGCCTGAGCCTGGCGTCCGTGTGGCTGGCGCAGAGGATGTGGACGCTGCGGAGCCCGCTCACCCGCTCCCTGTACGTGAACATGACAAGCGGCCCGGGCGGGCCGGCGACGGCCGCGGGCGGCAGGAAGGAGAACGACCAGTGGTATGTGTGCAACAGAGAGAAATTATGCGAATCACTCCAGGCTGTCTTTGTTCAGAGTTACCTTGATCAAGGAACACAGATCTTCTTAAACAACAGCATTGAGAAATCGGGCTGGCTATTTATCCAATTATATCATTCTTTTGTGTCATCTGTTTTTAGCCTGTTTATGTCTAGAACATCTATCAATGGGTTGCTAGGAAGAGGCTCAATGTTTGTGTTTTCACCAGATCAATTTCAGAGACTGCTTAAAATTAATCCAGACTGGAAAACCCACAGACTTCTTGATTTAGGTGCTGGAGATGGAGAAGTCACAAAAATCATGAGCCCTCATTTTGAAGAAATCTATGCCACTGAGCTTTCTGAAACTATGATATGGCAGCTTCAGAAAAAGAAATACAGAGTGCTTGGTATAAATGAATGGCAGAATACAGGGCTCCAATATGATGTCATCAGCTGCCTGAACTTGCTGGACCGCTGTGATCAGCCCCTGACTTTGTTAAAAGATATCAGAAGTGTCTTGGAGGCCAACTAGAGGCAGGGTTCATCCTGGCCCTGGTCTCCCCCTTTCATCCCTATGTGAAAACGTAGGTGGCAGTGGGAGAAACCATCAGAAATTTGGAATCAAGGACGACTGGAGACAGTGATAGTCTGCTGAGTTTCAGAAAGCTGTTTGTTATCGAAGCTTTCACAGACTGCATACCTGTTGTAGGCACTGTTTATTGACTCTACGTCTGGATGAGCATGCTTGTCAAACAGTTAAACCGGTGGGAGTTCGAAGTCT 3 2 5' arm Macaca_fascicularis mirnest 100 100 -19.4 ...(((((((.(((((((..(((((((.((.(((.....))).)))))))))...)))))))..)).))))) (-19.4)