mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GACTGGACCAGCTGAGGAGAT CTCATCACTGGAATGTTTC CATGAGCTGCATCTCATCACTGGAATGTTTCAGCGACTGGACCAGCTGAGGAGATGCCTTCGCC CTTTCTTTGCGGAATCACCATGGCGGCTGGGACCCTGTATACGTATCCTGAAAACTGGAGGGCCTTCAAGGCTCTCATCGCTGCACAATACAGCGGGGCTCAGGTCCGCGTGCTCTCCGCACCACCCCACTTCCATTTTGGCCAAACCAACCGCACCCCTGAATTTCTCCGCAAATTTCCTGCCGGCAAGGTTCCAGCATTTGAGGGTGACGATGGATTCTGTGTGTTTGAGAGCAACGCCATTGCCTACTATGTGAGCAATGAGGAGCTGCGGGGAAGTACTCCAGAGGCAGCAGCCCAGGTGGTGCAGTGGGTGAGCTTTGCTGATTCCGACATAGTGCCCCCAGCCAGTACCTGGGTATTCCCCACCTTGGGCATCATGCACCACAACAAACAGGCCACTGAGAATGCAAAGGAGGAAGTGAGGCGAATTCTGGGGCTGCTGGATGCTCACTTGAAGACGAGGACTTTTCTGGTGGGCGAACGAGTGACATTGGCTGACATCACAGTTGTCTGCACCCTGTTGTGGCTCTATAAGCAGGTCCTAGAGCCTTCTTTCCGCCAGGCCTTTCCCAATACCAACCGCTGGTTCCTCACCTGCATTAATCAGCCCCAGTTCCGGGCTGTCTTGGGGGAAGTGAAGCTGTGTGAGAAGATGGCCCAGTTTGATGCTAAAAAGTTTGCAGAGACCCAGCCTAAAAAAGATACACCACGGAAAGAGAAGGGTTCACGGGAAGAGAAGCAGAAGCCCCAGGCTGAGCGGAAGGAGGAGAAAAAGGCGGCTGCCCCTGCTCCTGAGGAGGAGATGGATGAATGTGAGCAGGCGCTGGCTGCTGAGCCCAAGGCCAAGGACCCCTTCGCTCACTTGCCCAAGAGTACCTTTGTGTTGGATGAATTTAAGCGCAAGTACTCCAATGAGGACACACTCTCTGTGCACTGCCATATTTCTGGGAACACTTTGAAAGGACGGCTGGTCCCTGTGGTACTCAGAGTATCGCTTCCCTGAAGACTCCCTCAGACCTTCATGAGCTGCATCTCATCACTGGAATGTTTCAGCGACTGGACCAGCTGAGGAGATGCCTTCGCCAGTGTCATCCTCTTTGACACAATAGCAGCTCAATTCTTTGAAGTCTGGTCTTCCGGAGCAGGAGCTGCCTTCCGCTGAGTCGAATGCAGGTGACTACGAAGTCAAACATGCGACTGATCTGCCGGAGGAACCTGAGCCTGGTCAGAGGATACTATTCTCTGGGAGAGGCTTGCT 4 2 3' arm Macaca_fascicularis mirnest 100 hsa-mir-3654 1.0E-14 -20.3 ..((((..(((((((.(((((((...(((.....)))....)))).))).))))))).)))).. (-20.3)