mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGCAGAGGCGGGCGGATCAC CATCTGCCTTGCCTCATGCCTGT TTCGAATTCGTCTTGAACTACTGAGCTCAAGTCATCTGCCTTGCCTCATGCCTGTAAACCCAGCACTTTGGAAGGCAGAGGCGGGCGGATCACCTAAGGTCGGGAGTTTGAGAGCAACCTGG GTGGATCCCCGGGCTGCAGGAATCGAATTCGAATTCGTCTTGAACTACTGAGCTCAAGTCATCTGCCTTGCCTCATGCCTGTAAACCCAGCACTTTGGAAGGCAGAGGCGGGCGGATCACCTAAGGTCGGGAGTTTGAGAGCAACCTGGCCAACACGGTGACACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGCTTGGTGGCACACGCCTATAGTCCCAGCTACTCGTGAGGCTAAGGCAGGAGAATCGCTTGAACTTGGGAGGAGGAGGTTGCAATGAGCCAAGATAGCGCCACTGCACTCCCGCCTGGGCGACAGAGTGAGACTCCATCCCAAAAAAAAAAAAAAAAAA 1 2 3' arm Macaca_fascicularis mirnest Metazoa_SRP 3e-20 mml-mir-619 0.000006 -42.7 ..........(((((((((.((((.((...((.((((((((.(((((.(((((......((((....)))).)))))))))))))))))).))...)).)))).)))))))))......... (-42.7)