mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACAGAACTGCAGTTACTTTTT GAGGAACTGCATTTTTGGCA TCATCCTTTTTCTTTGCTTTTGCTGTGATGGACAGAACTGCAGTTACTTTTTCTGCAACCTCTTTCTTCTTTTCCTCTAGAGGTGCTGGGTATCCGTAAGTGGATGGCTTTGCATTGGAGAGGAACTGCATTTTTGGCATTTTCAGTTCAGAGTTCAGCCCAATAAG CCTTCTCCTCGTCTACCTCCATTTTCTCATCCTTTTGCTCCTTTTTCTTTCTTTCATCATCCTTTTTCTTTGCTTTTGCTGTGATGGACAGAACTGCAGTTACTTTTTCTGCAACCTCTTTCTTCTTTTCCTCTAGAGGTGCTGGGTATCCGTAAGTGGATGGCTTTGCATTGGAGAGGAACTGCATTTTTGGCATTTTCAGTTCAGAGTTCAGCCCAATAAGACAAGTAGGTGTAAAGGCCATTGACAAGAAATGGGCCAGTGGGAACCAATACCAAAACTGTGTGAAGACAAACATGCCAACAACTGACGTCATGCTTGTATGTCCAGTGCGAGACTGGAGAGAGATAGTCATGTTGCGGCCACCTGCATCAATAATTCCTTGAGCAAGAATGGCTCCAAACTTTGCAATTGAGTCTTCGTGTTTGTCTCCAATCACCTTTGCATACAACTGGCGGAAATCTTTTACTTTTGGACATGTGCTTTCTGTCTGCTGTATCAAAACTAAAGCTGATGCAATAAGGGCTCCTTGGCGAACAAAATTAACGGGGTCATTTGTAAGTGGCTCCAACAATCCTAGAGATTCCTTTCTGTCCAGTGCCAGAACAAGCAACTCCAAGAGCCATAGCAGCACCATACCGCACATGTGGGTTATAGGATTCTGACAAAAGGGAGACCATGCTAGGTATCTGATCTGGTGATCTGAATAGCAAGAAACCTAAAGCTTCTACAGCTGCTCGTCTGACATCATTATC 2 1 5' arm Litopenaeus_vannamei mirnest 100 100 -41.1 ...............(((((.((((.((((..(((((.(((((((.(((((((.(((((((((...............))))))...((.(((((......))))).)).)))...)))))))))))))).))))).))))..))))..)))))............. (-41.1)