mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGGGCGTGGTGGCGGGCGCCT GAGATCGAGACCATCCTGGC GGCACGGGGTCAGGAGATCGAGACCATCCTGGCTAACGTGGTGAAACCCCGTCTCTACTAAAAGTACGAAAAACTGGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCAG GCACGAGGCACGGGGTCAGGAGATCGAGACCATCCTGGCTAACGTGGTGAAACCCCGTCTCTACTAAAAGTACGAAAAACTGGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCAGCTACTCGGAGGCTGAGGCAGGAGAATGGCCTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACACAGCGCCAGACTCCGTCTC 5 1 3' arm Papio_anubis mirnest Metazoa_SRP 5.0E-25 ppy-mir-1268 1.0E-9 -34.4 .....((((.((((...(((..((((((((((((((((.(((...))).))).((((((...)))).)).....)))))))).)))))..)))...))))...)))).. (-34.4)