mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCCCTGCCCTCAAGGAGCTTA GGCACTCGGGGGTGCAGAGATA CAGCACTATACTAGGCACTCGGGGGTGCAGAGATACAAATGTAAAAGTTATTATCCCTGCCCTCAAGGAGCTTACAATTTAATT TACTATGTGCTCAGCACTATACTAGGCACTCGGGGGTGCAGAGATACAAATGTAAAAGTTATTATCCCTGCCCTCAAGGAGCTTACAATTTAATTTTGGAAATAAATACAAATATGAAACTATAACACAGAGTGCTAGAAAATAATTACAAAGCAACATATAAGTACATGGACCACAGTATAAACTCAAAGGTAAGTGCTGAGGCAGCACAGAATGAGGGAGGTCACCACATAAGGTGATGTCAATCAGGGAGAGCTAACTCAGAAGATATAAAGATAAGCTTTGAAGGGAGTGATGAACATGAGCTGGGACCAAAGAGCAATCTAAGCAAAAAGAATACCATGAGAAAGGCACAGAGGCAAGAGCTTGTAAGACATCAGTAGAAGGCTGTAGGAAGTTTGAATCTGTTGAATCAAGGTGAATATGCTAGAGAGTAATGAAGGCTGATGAATATTAAGCATAGAGGTAATGGAGAATTTGGAACACCACTGCTCCATAGGAATTATCTACTGGGTGTTACTTAGTGAAAATGAAATTTTACAATAGAGATATTGTAAAAAACCGGTGTTTGAGGAGGATTGCCTTGGAAAAATTATCTACTGGGTGTTACTTAGTGAAAATGAAAATTTTACAATACAAATATTGTAAAAATGGAGTTTGAAGAGGACCACCTTGGAAACTTTATACAAGATGGGGATCCTGGGAGCAAGGAAATTGGAAAAAA 4 1 3' arm Papio_anubis mirnest mir-28 0.000004 eca-mir-708 0.00002 -19.3 ...........(((((.((..((((.((((.((((..(((......)))..)))).))))))))..)).))))).......... (-19.3)