mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CACAAACAAAGCATTTTTTTC AATGAATGCAATTGTTGTTGTT TCCCACACCTCCCCCTGAACCTGAAACATAAAATGAATGCAATTGTTGTTGTTAACTTGTTTATTGCAGCTTATAACGGTTACAAATAAAGCAATACCATCACAAATTTCACAAACAAAGCATTTTTTTCACTGCATTCTAGTTGCGGTTTGTCCAAAC TCCCACACCTCCCCCTGAACCTGAAACATAAAATGAATGCAATTGTTGTTGTTAACTTGTTTATTGCAGCTTATAACGGTTACAAATAAAGCAATACCATCACAAATTTCACAAACAAAGCATTTTTTTCACTGCATTCTAGTTGCGGTTTGTCCAAACTCATCAATGTATCTTATCATGTCTGGATCCGGCCGCCTCCCCCCTCGAAAAGCTTTCTAAACCATTCGTTTGGCGCGCGGGCCCAGTAGGTAAGTGAACATGGTCATACCTG 5 1 3' arm Lepeophtheirus_salmonis mirnest SVLPA 2e-19 100 -21.6 ..............................(((.((((((..(((((..((..((.((((.((((((...((((...........)))).)))))).....)))).)).))..))))).)))))).))).((((((.......)))))).......... (-21.6)