mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTGGGCAACATAGCGAGACCT GATCGCTGTGAGCCCAGGA CTGAGGCAGGAGGATCGCTGTGAGCCCAGGAGTTTAAAGCTGCAGTGCCCTGTGGTTGCACCTGTGAATAACTGCACTCCAGCCTGGGCAACATAGCGAGACCTCATCTCCAA TGAATGACCTTATCTGTTTCCTGGATAATACCTTTAAGAATAATGTCCTGAGTCAGGCGTGGTGGTGCGTGCATCTAGTCCCAACTATTTGGGAGGCTGAGGCAGGAGGATCGCTGTGAGCCCAGGAGTTTAAAGCTGCAGTGCCCTGTGGTTGCACCTGTGAATAACTGCACTCCAGCCTGGGCAACATAGCGAGACCTCATCTCCAAAAAAGAAAACAAAAAACAAAAAAAGGAATGATGTTCTGGTAGAGATGGCCTTTCACTTGAGGAGTACTCAGTTTTCAGGTTCTTCCTAGCTGTGGGGCTTTTAAATTTGGAAATCTAAACATTCTTTCCCACCATCCTTTTGGACTGTGGACCTGTGGTTTTCTCTTCTAAGTTTCTGTCCCTCTGCTTCCTTACTTTTTTTCCTTTTGGAATTCTATCTTTATCTGTCTTTGGTTCACTTTTTAATGCTATATATGGGCAGGGGTGAGAGACATTACTGAGCACCTTGGTGAGCAAGCCTGGCTTTAAAGATGGGAGAAGAGCTTCTGGCACCAGAAACCTGTT 2 2 3' arm Homo_sapiens mirnest Metazoa_SRP 0.000000000000007 ssc-mir-1285 0.000000001 -42.9 ..((((...((((.((((((((.((((((.........((((.(((((...((..((((....))))...)).))))).))))))))))..))))))))..)))).))))... (-42.9)