mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAAGTGCATCCTTTTAGAGTGT CCTCTACAGGGAAGCGCTTTCT AAGAAGATCTCAGGCTGTGTCCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAGGAAAGTGCATCCTTTTAGAGTGTTACTGTTTGAGAAAAGCA CTTCAACATCTTCGATTCCATTTTGGGTGCCTCCATGGGGACTGTGTGTCCCTGTACTGGAACCCAAGTGAAGACTTGGCTCAGAGTCCATTTGCTGTTCTCTAGAAATCCAGCCTAATCCTCTTGTGCAAATATAATATATATCTAGTAGGCATTGCTTTTTCTTTCTGGAGACAAAACACAGGAGGATTGCCCCTTGATGAACAGGACTAACCTGCTGATTCTTTGAAGCAAGGAACTGGAAATGGTCCTTTTAGGGATTTATGCTCTGGATTCCAGAAAACACGCAAACAGGGCCAATAAATGCATCTTTATTTTTGTGTCCATTTTGACCTGGTCAAGGAAGATTCCAACAAAAAATCCACAGTGCCGGAGCAAGAAGATCTCAGGCTGTGTCCCTCTACAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAGGAAAGTGCATCCTTTTAGAGTGTTACTGTTTGAGAAAAGCAACGTTGAAGTTGATGCTGATTTTGGTAATACATTTGCAGAGCATGCTTATCATCAGACTTGGATGATGTTGGGTTCTGTTTTTGCTTTGTTTTTTTTCCAAGACAGTGTGTTTGTTGCCCANGCTGGAGTGTGGTGGTACTTCCCACCTAGATCTCTTGGGCTCAAGAAGNCTTTTTTTATTTTTCTTTCTCAAGAGAGAGTCTGGTGGTGACACCCANGCTGGAGTGCAGTGGGNGCATTATCAGCT 5 0 3' arm Homo_sapiens mirnest mir-290 1e-40 hsa-mir-519a-2 3e-44 -37.8 .......((((((((.(((...(((((.(((((.(((((((((....(((...)))..))))))))).))))).)))))...))).))))))))...... (-37.8)