mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AATGATGTTATTTTAGAGGTG CTGGAGGTGACATCTGCCA AATATGACAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATTTA CCAGGGCCTTTAATAAAACAAGAATGGNAAGNNCAGTTACAAGAAACTTTGCACTTGGNAAGNAAAAGGCANNACCCATTGNATCAAAAAATCAACATGTTGTACAATGAGCTTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATTTACCCGAGAAATATTTGACATGTACCAGAATTATTCGTGCTATAAACACTGGCAATTTGAACTTCTGAATTATACACCAGCAGATTATGGTAGGCATATTGAGGAATTTGCCTGTAGGAGATACTGAAAATTATTTTACCTCTGATCTTGATTAGAACCATATTGTCCCATTTTTTTTTTGAAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGGAGGGAAGCATTTGCTTAGGGAGAAATATGTGAATTAGAGAAAATTCCCCTGAGGAACTTAGATACGTATCTTGCCTCAAAATTATTTTTCTCTATTATTGAAAGCAAAGGTATATTAAGGTTTTTACTTTAAATAACTTTATAAAATAATATAAGTATTACTAATTAGA 4 2 5' arm Homo_sapiens mirnest 100 cin-mir-4208 0.0008 -15.8 ..............(((((((((((...((((....((....))..)))).)))))))))))............. (-15.8)