mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCCTTGGGTCTGATGGGGTAG GCCCCATCTGTGCCCTGGGTA TGAGCCTCAGTTGCCCCATCTGTGCCCTGGGTAGGAATATCCTGGATCCCCTTGGGTCTGATGGGGTAGCCGATGCCT CAGAGCCGCAACCTGCACAGCCATGCCCGGGCAAGAACTCAGGACGCTGAATGGCTCTCAGATGCTCCTGGTGTTGCTGGTGCTCTCGTGGCTGCCGCATGGGGGCGCCCTGTCTCTGGCCGAGGCGAGCCGCGCAAGTTTCCCGGGACCCTCAGAGTTGCACTCCGAAGACTCCAGATTCCGAGAGTTGCTGGAAACGCTACGAGGACCTGCTAACCAGGCTGCGGGCCAACCAGAGCTGGGAAGATTCGAACACCGACCTCGTCCCGGCCCCTGCAGTCCGGATACTCACGCCAGAAGGTAAGTGAAATCTTAGAGATCCCCTCCCACCCCCAAGCAGACCCCATATCTAATCAGGGATTCCTCATCTTGAAAAGCCCAGACCTACCTTTGAGCCTCAGTTGCCCCATCTGTGCCCTGGGTAGGAATATCCTGGATCCCCTTGGGTCTGATGGGGTAGCCGATGCCTGATTTGCAACCACAACGTAGGGAGGTATATAACCTGTCCCCAAGTTTGCAAATGGGGAAACTGAGGTACAGCGGATGCCAGGGACCCTCCTGAATGTGCACAAGCAGCTGGGAAACCCGGGGACGGGGTCAGGGCAGTGCGGTGTGGTGCATAGGTCCCTGACCTGGGCTGGGGACAGGAATCCAAGAGAA 3 2 3' arm Homo_sapiens mirnest 100 hsa-mir-3189 5e-36 -34.9 ...((.((.(((((((((((...((((.((((((((...)))))....)))..))))..))))))))))).)).)).. (-34.9)