mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTGGCTGTTGTGGTGTGCAAA TGCCACACTGCAACACCTTACA TGTCTAAMTTTTTAWTTTTGGTCTGGCTGTTGTGGTGTGCAAAAMTCCGTTCATTGTCTATTTTGCCACACTGCAACACCTTACAAGATGTGGAAGAWGTGAA GCGCAGAAGCATTCAGATGTCACTTGATGATCTGTAAAGGGAACTTGCTGATTTGGGAATGTGCTTAAGGGAAACAACAACAATTCCTTTTGACAAGGGTCTGTCAMTGGGTGGGTGAWGAAWTAAAAAAATGAMATGTGCTTTTTTTTCTTTTTTCAACCTCAAWGGTAWTCCTAMARGAAAWGGAWAACCAWTTTAACTGTATTTTTTGCAGCCCGTACCTTCTTGGGAATAMAAWTGTCTAAMTTTTTAWTTTTGGTCTGGCTGTTGTGGTGTGCAAAAMTCCGTTCATTGTCTATTTTGCCACACTGCAACACCTTACAAGATGTGGAAGAWGTGAAATTTGTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTYATCTAATTKKAAGAAHAKCKCKCAGTACMWAAAMAAGCAYAARCAAATCACTTTTCTTTTACACCKATTAWCATTAAAGCAARAGGAKYGTCCTTAWACWYTSGCGYTACGTTGAARCTAAAAYAWGYAAAWAAAACCCAAKRTGGCTTCWGARARGACGAAKCARATGGTTCAGGRAAGGAARACATWAAGGAAAAGAGGKAWDWAACGAGTCACAACGGGGRCKAAAAAACMAAAAAAARGAATAGGAGGGKGATWTAAAMCAAGAAAGTGAWACTTWTGCCGAWARRKGGAAAARMAAWTCACGCYTWCCAGGWAAATTTTGGAAACGRTTKTKCCAHAARADTAGRGTTTTTRAACGATTTKTDTMARAGTTMAARGTKTKKCGTATYGGAGSTTTCCGGGGGWGWGGAGGKAAGAAGGAGKAACKTKGGGAMAAAAACWCGKYKGGMAAAAGGGGGGGKTKAAATTCATATTTRACCGGKAAATTT 3 2 5' arm Homo_sapiens mirnest 100 hsa-mir-3064 3e-30 -26.1 ....((..((((((.(((((....((.(((((((((((((((((................))))).))))))))))))))...)))))..))))))...)).. (-26.1)