mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGACAGCACGACACTGCCTTC AGGTAGTTTCCTGTTGTTGGG TTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTC CACTGGCGGGCGCAGGTTGCCTAGGGGCTGGGCTGGGCCGGGCCAGGCGCGATGGCAGGGTTCTCTCCTTGGCGGCGGCGGCAGCGGCGGAGGCGGCGGCGGCGGCGGGCGAGGCAGCCCTTCGCGGGCAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCAT 4 0 3' arm Homo_sapiens mirnest mir-196 3e-21 mml-mir-196b 8e-28 -24 ...(((((((.((.(((((((((((..........))))))))))).)).))))))).. (-24)