mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAATTGGTGTCTTGGGGAAC ACCTCGGTATATCATTTTAAT CATATACACTTTAAATTGGTGTCTTGGGGAACCACCTCGGTATATCATTTTAATAGCGCATC GTGCTATAGCAATGATCCAGGAGTAACAAGGAACTAGAAAAGCACAAAGTGATAGTAACATCCTTCAAGTAAGATGAAGCAAAGCTGATATTAATGTGAATATACTTTATATATACTTATATTCGTGTTAATAATACTTTGCCTGTAATACATATAACCATATAATGGGGAATAAGAAACATCTTAGGAAAAAGAAAACAAAAAATAAAATTTCACTGTTTACACTGTGCCTTGGTCCAGTAACCCTGCACTGCACATATACACTTTAAATTGGTGTCTTGGGGAACCACCTCGGTATATCATTTTAATAGCGCATCCTGGAGAATATATTTGAGTGGATCACATATTACAACTGATTTAAACTTTGACCCATATAGAAATGTTTTCACAAATATGTCTGAAGCCTGGATACTGTAAAAATGTTTATCATCATAGAATAATAAAAGGCTAGCCATTAGTTACTCAGAAATTGTTCAGTAAATCTAAGATGACTTAGACCTAAATAGTTATGAGTGAATATAGTTCATC 5 0 5' arm Homo_sapiens mirnest 100 100 -13.5 ..........(((((.((((((.((((((.....)))))).)))))).)))))......... (-13.5)