mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGGGCGTGGTGGTGGGCGCCT GAGTTCAAGACCAGCCTGGC TCCCTGAGTTCGGGAGTTCAAGACCAGCCTGGCCGGCACGGAGAAACCCCGTCTCTACTAAGAATACAGAATTGGTCGGGCGTGGTGGTGGGCGCCTGTAGTCCCGG AGCTGCGCCGCGCGCCTCCGCACGCTGGGGGCTCTGTGCCGGCCGCCAGTAGGCCGGCGCCTGCCGGGAAGCGAGCCGCGACCCGAGCTGAGGTCATTTTCTTCTGAGGAAGTCATTCTTAAGGACTGTTCTGTCCCCAACCCCAGCTGGAACAAGGACCTAAGACTGCTCTTTGACCAGTTTATGAAGAAATGTGAAGATGGCTCCTGGAAACGTTTGCCTTCATATAAACGTACACCTACTGAATGGATTCAAGACTTCAAAACCCATTTTCTTGCCTGGTTAATGGCCGGGCGCTGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCGGATCCCTGAGTTCGGGAGTTCAAGACCAGCCTGGCCGGCACGGAGAAACCCCGTCTCTACTAAGAATACAGAATTGGTCGGGCGTGGTGGTGGGCGCCTGTAGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCGACCCANAGCTTATGAAAGAAGAACAAATGTCACAGGCCCAGCTCTTCACCAGAAGCTTTGATGATGGCCT 3 1 3' arm Homo_sapiens mirnest Metazoa_SRP 1e-19 ppy-mir-1268 0.0000003 -31.3 ((((.......)))).......((((((((((((((...(((((.......))))).((........))..)))))))))).))))..(((((.......).)))). (-31.3)