mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGGTGACAGAGCAAGACTCTG AGGTCTCACTATGTTGCCCAG CACTCCAGACTGGGTGACAGAGCAAGACTCTGTCTCAAAAACAAACACACAAACAAATAAAAAGAGATGAGGTCTCACTATGTTGCCCAGGCTGGTCT ATAGAGATAAGGTCTTACGGGCCAGGCGTGGTGACTTACGCCTGTAATCCCAGCACTTTGGGAAGCTGAGGTGGGTAGATCACTTGAGACCGGGAGTTTGAGACCAGCCTGGCCAAAATGACAAAATTCCATCTCTACTAAAAATACCAAAAATTAGGCAGGCATATGGCACATACCTGTAACCTCAGCTATCCGGGAGGCTGACGAACGAGAATCACTTGAACCCCAGAGGGTCAAGTTGCAGTGAACCAAGATTGTGCCACTGCACTCCAGACTGGGTGACAGAGCAAGACTCTGTCTCAAAAACAAACACACAAACAAATAAAAAGAGATGAGGTCTCACTATGTTGCCCAGGCTGGTCTCGAACTCCTGGGCCGACCATTCCTCCTG 4 0 5' arm Homo_sapiens mirnest Metazoa_SRP 0.0000000004 ppy-mir-1273 0.00000002 -31.1 ....((((.((((((((((.((..(((((.((((((...........................)))))).)))))..)).)))))))))).))))... (-31.1)