mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AATGGATTTTTGGAGCAGG TTCAGAAAGTCTCCAAG TTAAATGGATTTTTGGAGCAGGGAGATGGAAAAAAACTAGAGGGGGCAGGGCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTTTCAGAAAGTCTCCAAG TTAAATGGATTTTTGGAGCAGGGAGATGGAAAAAAACTAGAGGGGGCAGGGCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTTTCAGAAAGTCTCCAAGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCACTCGGGGCCCCGCTGCCCCAGCTGATCCCCACTCATTCCACACCTCTTCTCATCCTCAGTGATGTGAAGGTGGGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGTGCAGCCCTACTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGTAGAAGTGAGGCCTGGGGTTTTGGGGGGAAAGGTCAGCTCAGTGCTG 4 2 5' arm Homo_sapiens mirnest U2 0.00000003 100 -36.3 .....((((((((((((...((((..((((.........(((...((.((.(((((..(((((((((...)))))......))))..))))).....)).)).)))))))))))))))))))...)))).. (-36.3)