mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAAAACCACAATTACTTTAGT AAAAGTAACTGAGGTTTATGC CATAAAGTACAAAGGTTGGTGCAAAAGTAACTGAGGTTTATGCAATTAAAAGTAATGACAAAAACCACAATTACTTTAGTATCACCCCAATACCTGTAT ACTCCTGCAAAGTACATAAAGTACAAAGGTTGGTGCAAAAGTAACTGAGGTTTATGCAATTAAAAGTAATGACAAAAACCACAATTACTTTAGTATCACCCCAATACCTGTATCTGGGCTTCTGCTGGGTCCTCCCGCTAGCACCCCCGCTTCTCTCCTAAGCCATAACACTCACCGGCTGGGGGGTATGAGAAGGTAGAACTCTGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGGACCCTGACGTTCATCC 4 0 3' arm Homo_sapiens mirnest mir-548 0.000000000000002 hsa-mir-548aa-2 0.000000000005 -23.6 ......(((((..((.((((((.(((((((.((.(((((.((..((((....))))..)).))))).)).))))))).)))))).)).......))))) (-23.6)