mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGGGAACGTCGAGACTGGAGC ACCCGTCCCGTTCGTCCCCGGA CTGGGCGCACCCGTCCCGTTCGTCCCCGGACGTTGCTCTCTACCCCGGGAACGTCGAGACTGGAGCGCCCA GCTGGGCGCACCCGTCCCGTTCGTCCCCGGACGTTGCTCTCTACCCCGGGAACGTCGAGACTGGAGCGCCCAAACTGAGCCACCTTCGCGGACCCCGAGAGCGGCGGCGCGACTCACCGCGGAGGCGCCCGGACGCGTCAATGTCCCCCAGGGCAAGGCCTGAACCAGGTCGCGAGGGTCTGTCTCCCGTCTGGGGAGCTGAACTGCCCGAGACACTGTCGCAGTCGCGGGGACTTGTCTGGAGCGGCGGGGTCTGAGCCCAAGTCGGAAGCCGCCGCCGCCGCCAGCGTCCCGTGCGCCTGCCGCCCCGGGACCAGCCGCGAAACTTCTTCTCGGGACGGAGACAGCGCTCGCCGCCCGGGCCGAGGTAGGAGCTGGCTGGGCTCGGTAGAGCGCGGGCGAATCGCTTTCGGCAGCGAAAGAACGTGTCGGGAGAAGCCAACTGCAGGACCAGGGCCCCAGCGGGCGCGCAGAGACGCCTGCCTTGGGCGGAGGTCCCCCCCTCCGGTTTTCGTGGCTCTGGTAGGGCCCTCTGTCCCGTGAGCTCCTCACTGGACCTGAGGCTACAGGCTTCAGCAG 5 1 3' arm Homo_sapiens mirnest 100 hsa-mir-1247 3e-34 -32.5 .(((((((.((.(((.((..(((.(((((...............))))).))).)).))).)).))))))) (-32.5)