mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TACAGTATAGATGATGTACTA GGATATCATCATATACTGTAAG CTGGCTGGGATATCATCATATACTGTAAGTTTGCGATGAGACACTACAGTATAGATGATGTACTAGTCC GAGGGACAGATCCTCCCTGCATCCAAAGGCCTCCTCAGTCTGCAGTTCCAGCTCCAGGTAAGTGCACCTTCTCTGGGTCTGTCTGCCTGTCTGCTTGTTAGTGTGACCAAAGGGAACCTTCTGCATCATTACGCCATCTCTGGCTTGTTTAACACTGGCCCTGGGTCCCTATGAGATCTTAACAGACCCTAGCTCCAGTCCCCTTCCCATAACCCACCTGGGCTGTGCCTGACCACAGAATCAAGGAGACGCTGGCCTGCGAGGGAGCTGTAGAGCAGGGAGCAGGAAGCTGTGTGTGTCCAGCCCTGACCTGTCCTGTTCTGCCCCCAGCCCCTCACAGTGCTTTTCAAGCCATGCTTCCTGTGCCCCCAGTGGGGCCCTGGCTGGGATATCATCATATACTGTAAGTTTGCGATGAGACACTACAGTATAGATGATGTACTAGTCCG 1 1 3' arm Homo_sapiens mirnest mir-144 5e-30 hsa-mir-144 1e-33 -24.9 ..((((((.((((((((.(((((((((.((((......))))..))))))))))))))))).)))))). (-24.9)