mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGAATTGTGGCTGGACATCTG GATTGTCCAAACGCAATTCTTG GAACTCAGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGGCCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCCGGGCGC GCACGAGGGGGAACCCGCAGGAGACCAGGGCCCTGAACTCAGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGGCCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCCGGGCGCAACAGGGGCGGGGGCCCCAGGGACAGGGCTCAGCGCGGGCGAGACCTCTCGGGGCGGCGGCTGGCTGGCCCCAGCGCGAGGATCGCGGTCCCGGCCCGCGCGCACAGAGACGCCGGTCCCTGCCACCAGCGCCGCCATCCGCATCCTCGTCCTTCTTCCTTCTCTGCGGGTGACCAGTCCCGGCCGGCAGGGTCCTTCAGTCGATCGCGTCGTTTTTCCTCCTTTCAAATTTCGGCCGGAACGAAGCCGGCACGCAGCGGCGGGGCCGAATGTGGTCCGCCCTCAGCCCAAGCCGCATGAAGTCGGGGGTGAAAGAAGAGGCCGGCCGAATGCGCCCGCTAACTCGTTTCGCAGTTGTTCTAACTTATCACCCCAATACTCCCTACCTAAACAAAACAAATCCTCAACCAACCCCTAAATCCCAAACAAACCAACCCCTCCCGCAAGCCCCTCCGGACGGACCGATGGGCTGAGCCTCCTCCAGCCGCTGCCAGGGTCCGACGGGCAAGCGTCACCAACGATGCGCTCCAGCCCGGCAATCTCCTCGG 3 1 3' arm Homo_sapiens mirnest mir-219 1e-34 eca-mir-219-2 3e-50 -42.7 ...(((.(((((((.(((((.(((.(((((..(((((((((((..((......))......)))))))))))..)))))))).))))).))))))))))... (-42.7)