mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAAAACTGTAATTACCTTTGC AAAAGTAATTGCTGTTTTGC AGACAAAATATTAGGTTGGAGCAAAAGTAATTGCTGTTTTGCTTATACTCTTAATGGCAAAAACTGTAATTACCTTTGCACCAACCTAATCGATGAGA AGGAGCGAGGCCTGGGTGGCGTTCCGAGACGAGGTCTGCCACTTGTGCTTGCCTCGCCTAGGAACATGACTTTTTGTTTCTCTATCTCCTCAGAACAGAGAGGCCTATTTGTACTACTGTTCATCAGTCGTTTTGTAGTAGGAAAGAGGAAGCACAAAGTTTCTTCCTATTTCCCAGTGATTAAAAGTGGCCCACCTTCCTAAGGGGGAAAATAAGAATTCCAAAGACAAAGCTCACTTGAATGTGCTGAGCCCCCTTCACTTGGCTGTTTTCTGTGATGGGGCCACACCGCTGTGGGTTACCACAGGGGAGCAAGGATAGAAACAGAGTGGGAGCTGGGGGCCACGCCTGTGTGACATTTCGGAGGACTCCAGCTCGAAGGTCCTTTCTGAGATGTTTGTGAGCAGGGACTAGGGCAGAGGGAAAGACAAAATATTAGGTTGGAGCAAAAGTAATTGCTGTTTTGCTTATACTCTTAATGGCAAAAACTGTAATTACCTTTGCACCAACCTAATCGATGAGAATTCCCATCTTCCCCCAAAGGGGAAATAAAAGGACATTTAGGGAAATCTGTCAGATAGTCTCAAAGGTAGGTCATCTGCAAGAAATCCATCCTGCCTCCGACTGACTTGGTGAGAAGTCCCATCCATTCCCAGACTCCATTTTCTTNAAGGAGAAGAGAAACTTTTGGAAACCACACTCAGGAACTCAGAGAAACGAGGAAAGAGANAAAGCAAGGGAAAGCCATTCATGAACCCCACTTTCCAATTCAGTGGATATTTTGCATGGCTCCCAAAAGGGAAAAGGGACGGGTGTATGACAGGGATTTGTTTTCTCCTACTGCCACTGACGAAAGGGAAAGGAAACGCATGAGGCCCCTTTGCCGTGCCCCGGGCTCCTTTCTGCCGGGGTCAGTCACTCCAGGCCCTGGGGCTTCTGAGGCCAGGCCCAGGAAAAGAAAAACCCAGGCCTTAACCTGGGGGCATTCT 3 1 3' arm Homo_sapiens mirnest mir-548 0.0000000000004 hsa-mir-548aj-2 0.000000000000001 -34 .........((((((((((.(((((.((((((((..(((((((............)))))))...)))))))).))))).))))))))))........ (-34)